Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015924266.1_cds_XP_016472629.1_64845
CDS Infomation

[gene=LOC107794632] [db_xref=GeneID:107794632] [protein=transcription factor GTE12-like] [protein_id=XP_016472629.1] [location=join(17131..18042,18176..18239,18322..18420,18514..18566,18658..18718,18809..18892,18995..19113,19203..19269,21670..21791,22029..22262)] [gbkey=CDS]
Sequence

ATGGTTACTGCTCAATCTCCGAAAGTGAACAGTTCTCTTCAGCTCCTGGAGTTGCCCACC
ATGAACGTTTGTGATAGCATGGTAACGAAGAAGCTGAAAATAAAAATTTCTTCCAAGGGG
GTGCGGGCTGAATCTGTGGGAGGCTCTGAGATGAATATAAAGGTGAGACTACCTATGCCA
TCTGACTCTAATAAACGTGCACCTGAGTTAGTGCTGGACAATGAAAGAGAGAAAAGGCGG
AAAATGGATCGGAATGTAAAGCAACAATGCTGTAACATTCTGAAAGGCTTAATGGCTCAT
CCTAGTGGGTGGCCCTTCCTTGTACCAGTGGATCCAGTCCAATATAATATTCCTGACTAC
TTCACTATAATTACAAGACCAATGGATTTCGGGACAGTCAAAGCTAAATTGGATGGCAAT
GTGTACTTCGATGTTGATGCATTTGCCGCTGATGTGAGGTTGACGTTTGCAAATGCAATG
AAGTATAATCCTCCTAATAATGATTTTCATCTCATGGCTAATAGATTAGATAATATTTTT
AATCAGAGGTGGAAGTTGCTGGAAGGAAAGTGGAAATCTGAGAGCAAAAAATTCAGCCAG
GATTGTGTTTCAAGTGATAAAAGAAATGGCTTTAAGAATACAAGGGAGACTTCCTTTAAG
AAATCTGCACCTCATGCTAATGGTCTGAGCAACAGGCTAATGCCTTTGGAGGAGAAGCAA
AAGCTGAAGAAAGAACTTGTTGATTTACTTAGGGGAAATGTAATTAAGAAAATGCAGAAT
GCTCTCCAAAAGTTTGGGTTGGTGGGTCTTAAAGAAGAGAAGCTTAGCCTGGACCTAGAT
AAGTATGATGATGACACACTATTGGAATTGAAGAGGGTGGTTAGAGCTTATTCCAATTTA
GCTACAGAAAAGGCAGAGCCCGCTAGTGTAAAACAAAGTGGTGGGCATCTGTCGTCCCAG
GAGACTGTCCAAAAAGATAGTAGCACAGGTTTTATTTGCTCTGCCAATACCAAGCAACAA
GCAAACACTATTGCTTGCCACCTTCAAGGTGTTGATACCCATGCTCGTCCCAGGAATTTT
CCTACAGAAAGAAAGCTAGAACAAGATCATTCGGGTGTTGCTAAAAGGGACAGAGAGGTG
ACAAACTCCTTGGCATCAGCTTCATGTAGAACTGATCTGAACTCTCATGGTGGTCTAGGA
GTACTTTATGAAGAAAATTCTTGTTCCAGTCCAAGTAGATCAACCTGTGCTTCCACTACT
ACATATGGTGAAGGCTGGGATCCTCTAATGAACATTGATCTTTCCCCGACTAAAGCACTA
CGTGCTGCAATGCTGAAGAGCCGATTTGCTGACACCATCATCAAAGCGAAACAGAAATCG
CTTCCAGTTGATGGTGATAAGGCTGATCTGCATAGAATGCAGCAGGAAAGAGCCCAACTA
GAAAAGCAGCAGCTTGAAGAGAAAGCCCGCATTGAGGCAGAACTTAAAGCTGCGGAAGTT
GCCTCTCGAAGGAAGGCAGAGTCTGATTTAAAGATGCAGCGGGAGAGACAACGGGAAGCT
GCCCGGATTGCTCTACAGCAGATGGAAAGGACCGTTGATTTTGAAGACAATTTGAAGATA
CTAAGAGATCTAGAAAAACTATGTAAATGCTGCTCAGATGCTGAGAATCTAACTGGTAAT
GGAGATGGATTCACTATCATATTGGGGGACAACCCTCTGGAAAGGCTTGGCTTATGCATC
AAAGAGGATTACTTAAATGATGATGAAGATGAAATATTGAATGGAGACTGGGAAGATGGG
GAGATCTCGTGCTAG

Peptide Sequence

PEP ID

XP_016472629.1
PEP Infomation

PREDICTED: transcription factor GTE12-like [Nicotiana tabacum]
Sequence

MVTAQSPKVNSSLQLLELPTMNVCDSMVTKKLKIKISSKGVRAESVGGSEMNIKVRLPMP
SDSNKRAPELVLDNEREKRRKMDRNVKQQCCNILKGLMAHPSGWPFLVPVDPVQYNIPDY
FTIITRPMDFGTVKAKLDGNVYFDVDAFAADVRLTFANAMKYNPPNNDFHLMANRLDNIF
NQRWKLLEGKWKSESKKFSQDCVSSDKRNGFKNTRETSFKKSAPHANGLSNRLMPLEEKQ
KLKKELVDLLRGNVIKKMQNALQKFGLVGLKEEKLSLDLDKYDDDTLLELKRVVRAYSNL
ATEKAEPASVKQSGGHLSSQETVQKDSSTGFICSANTKQQANTIACHLQGVDTHARPRNF
PTERKLEQDHSGVAKRDREVTNSLASASCRTDLNSHGGLGVLYEENSCSSPSRSTCASTT
TYGEGWDPLMNIDLSPTKALRAAMLKSRFADTIIKAKQKSLPVDGDKADLHRMQQERAQL
EKQQLEEKARIEAELKAAEVASRRKAESDLKMQRERQREAARIALQQMERTVDFEDNLKI
LRDLEKLCKCCSDAENLTGNGDGFTIILGDNPLERLGLCIKEDYLNDDEDEILNGDWEDG
EISC

Transcript Sequence

Gene sequence data has not been registered.